VariantPro Targeted Sequencing Service
LC Sciences offers a customized solution to high-throughput genome wide variant analysis. The VariantPro™ system is an innovative amplicon-based targeted sequencing technology for variant discovery and detection.
Our Comprehensive Service
The VariantPro™ targeted sequencing system offers cost-effective, ultra-high resolution sequence analysis that enables accurate detection of rare variants. The flexibility and scalability of the technology means a custom assay can be tailored to fit a wide array of applications based on your specific needs.
This service is comprehensive – from sample to data, providing advanced technology and years of experience.
Our “Sample to Data” comprehensive service includes: primer designs, sample QC, sample preparation (target selection, sample bar-coding, molecular tagging, library amplification), high-throughput sequencing, bioinformatics analysis, and customer data report including:
- Annotated SNP/indel list for targeted regions (dbsnp, snp type, refseq genes, etc.)
- SNPs/indels in VCF format
- Genotyping-ready results delivered using VarSifter
| Variant Analysis Platform | VariantPro™ Targeted Sequencing Technology |
| Starting Sample Material | Your genomic DNA sample |
| Sample Requirement | As low as 10ng |
| Species Covered | Any species for which reference genome exists |
| On-target Specificity | > 97% |
| Coverage Uniformity | > 97% |
| Full Data Analysis Included | √ |
| Data Delivery Time | 4-6 Weeks |
Also available – custom and standard panel capture kits
Data Analysis
- Target enrichment report, including capture specificity and completeness
- Alignment to reference sequence
- Quality metrics, including mapping statistics, hybridization and selection metrics, mapping stats, and basecall quality distributions
- Annotated SNP/indel list for targeted regions (dbsnp, snp type, refseq genes, etc.)
- SNPs/indels in VCF format
- Genotyping-ready results delivered using VarSifter
