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DNA/RNA Aptamer Microarray Service

 

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Discovery of Protein-Binding DNA Sequences on an Aptamer Oligonucleotide Microarray

  • Identify specific sequences.
  • Differentiate single strand vs. duplex binding.
  • Identify high definition patterns of the binding.

Chip Design

  • Contains both single stranded and duplex oligonucleotides
  • Varying sequence lengths

Assay

  • Sample - CUGBP1 is a Myotonic Dystrophy (DM1) related protein

Detection

  • Anti-His and Cy3 IgG

Results

  • Figure 1 - Schematic of detection with secondary antibody on aptamer microarray

Figure 1

 

  • Figure 2 - A commonly accepted RNA-binding protein found to be DNA-binding as well.

Figure 2

 

  • Figure 3 - Fluorescent image (inverted) of 4K aptamer binding microarray

Figure 3

 

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